CDS

Accession Number TCMCG057C32217
gbkey CDS
Protein Id XP_018438382.1
Location join(12414749..12414917,12415014..12415129,12415229..12415467,12415655..12415864,12415989..12416175)
Gene LOC108810800
GeneID 108810800
Organism Raphanus sativus

Protein

Length 306aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018582880.1
Definition PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category C
Description Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q)
KEGG_TC -
KEGG_Module M00009        [VIEW IN KEGG]
M00011        [VIEW IN KEGG]
M00148        [VIEW IN KEGG]
KEGG_Reaction R02164        [VIEW IN KEGG]
KEGG_rclass RC00045        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00235        [VIEW IN KEGG]
EC 1.3.5.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00020        [VIEW IN KEGG]
ko00190        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04932        [VIEW IN KEGG]
ko05010        [VIEW IN KEGG]
ko05012        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
map00020        [VIEW IN KEGG]
map00190        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04932        [VIEW IN KEGG]
map05010        [VIEW IN KEGG]
map05012        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
GOs GO:0000104        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006119        [VIEW IN EMBL-EBI]
GO:0006121        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006163        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009055        [VIEW IN EMBL-EBI]
GO:0009060        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009123        [VIEW IN EMBL-EBI]
GO:0009126        [VIEW IN EMBL-EBI]
GO:0009141        [VIEW IN EMBL-EBI]
GO:0009144        [VIEW IN EMBL-EBI]
GO:0009150        [VIEW IN EMBL-EBI]
GO:0009161        [VIEW IN EMBL-EBI]
GO:0009167        [VIEW IN EMBL-EBI]
GO:0009199        [VIEW IN EMBL-EBI]
GO:0009205        [VIEW IN EMBL-EBI]
GO:0009259        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019693        [VIEW IN EMBL-EBI]
GO:0022900        [VIEW IN EMBL-EBI]
GO:0022904        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042773        [VIEW IN EMBL-EBI]
GO:0042775        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045273        [VIEW IN EMBL-EBI]
GO:0045281        [VIEW IN EMBL-EBI]
GO:0045333        [VIEW IN EMBL-EBI]
GO:0046034        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0070469        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072521        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098803        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990204        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTCCGGTTGCTGCAGCGGAGAATATGCAATCCAGCGGCGGAGAAAGTACGTTTGAGCAGCAGTTTAAGTGGCAACGGAGGCTTTCCCATCTTAAAAGGTCACAAGGCTGCTCAGGACTTGTCCAAAGATACTCTAAAGTCCCATGAAACAATCAAAGACAAAGAAGGCCAACACAAAGTGACCAAGAAGGAGTTCAAGATTTACAGATGGAACCCTGATAAGCCAAATACTAAACCCTTTCTTCAATCATTTTTCGTTGATCTTTCAACTTGCGGCCCCATGGTTCTGGACGTCTTACAGAAGATAAAAGCAGAGGAAGATGCGAGTTTGAGTTACAGGAGATCATGTAGAGAAGGAATATGTGGATCTTGCTCGATGAACATCGACGGTACTAATACTGTTGCATGTCTTAAACCTATAAACTCCGACACGTCGAAGCCAACCATTATCACTCCCTTACCTCACATGTACGTCATCAAAGATTTAGTCATCGACCTCACTAATTTTTACCAACAATACAAATCAGTCGAGCCATGGTTAAAGACAAGGAAGCCGCCTAAAGATGGACGTGAGCACCGTCAATCACCACAGGACCGGAAGAAACTAGACGGGTTGTACGAGTGCATACTATGCGCGTGTTGTACCACGTCATGTCCTTCTTATTGGTGGAATCCCGAGGAGTTTCCAGGACCTGCGGCTTTACTACAAGCGTACCGTTGGATCAGTGACAGCCGTGATGAGTTTAGAGAAGAGAGGTTACAAGCGATCACAGAGGATGAAAGGAAAGTGTATAGATGCAGAGCAATCAAAAATTGTACGGCCACATGTCCTAAAGGACTTAACCCAGCTAGTGCCATCTTGAAGATGAAGGCTAAGCATTCGCTCCCTGATCCGGTCAAGAGAGCTGAGAGAGCCTAG
Protein:  
MFRLLQRRICNPAAEKVRLSSSLSGNGGFPILKGHKAAQDLSKDTLKSHETIKDKEGQHKVTKKEFKIYRWNPDKPNTKPFLQSFFVDLSTCGPMVLDVLQKIKAEEDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINSDTSKPTIITPLPHMYVIKDLVIDLTNFYQQYKSVEPWLKTRKPPKDGREHRQSPQDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEFREERLQAITEDERKVYRCRAIKNCTATCPKGLNPASAILKMKAKHSLPDPVKRAERA